PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023897254.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NF-YB

Protein Properties

Length: 277aa MW: 29580.7 Da PI: 3.8992

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023897254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	54.5	2.8e-17	35	127	5	97
NF-YB 5 drflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 + lP + v+r+ k vlP n++i kda +++ ++ f+s+++s+++++++ +++kti++ d++ al + +e+++ l++ l+ky +++ ek XP_023897254.1 35 ELTLPKSMVARLAKGVLPPNTQIQKDALLALHKSATVFVSYIASNSNENARTNNKKTIAPTDVFAALKDAELENFLPRLEAELQKYNDIQCEK 127 567999**********************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MAPRKSNVST VSNGADEAAE SPAPKPVKDG MSVEELTLPK SMVARLAKGV LPPNTQIQKD 60 ALLALHKSAT VFVSYIASNS NENARTNNKK TIAPTDVFAA LKDAELENFL PRLEAELQKY 120 NDIQCEKRNT YRRKVKEEKA STTAVTVEIP VSTDKKPTAS VQGAGSLANG HVDDGPRPAK 180 KLRTESGQAI VPDGEGEGGN VDLEEGGSGE DGEEGEEGDE VADDEEAEED EDEDEDEGED 240 DDDEGDATLD ETMEEEDGGG EEVSGMRDEA LDDPDSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	1e-13	NF-YB family protein