PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896737.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 386aa    MW: 41618.4 Da    PI: 6.7315
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20153202255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  XP_023896737.1 153 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 202
                     7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MVTQPMFSDL TRATEMTAMV SALRHVVSGQ SGGDSWGYGS SYGGGVYSAS PSPPLSAYSS  60
SSSPAFASAS ASWSGQKRGR EEEEGVSQLI ESIPRGYRGP SADFRLSQGD SSSGATVKEE  120
ATNTNIVATT TSTTAPETPT SENVEETGER RRRYRGVRQR PWGKWAAEIR DPHKAARVWL  180
GTFDTAEAAA RAYDEAALRF RGNRAKLNFP ENVRLPPPPP PPQPLQQNYS TPLNPISISD  240
SPTTHLLPMT LPQSFQQQFF QVQPQAYQGS SVSDYLQYSQ LLQSSGDFQH GQQPSSLLEH  300
MFYNSQLAAS ASLQSSVLPS SSSLTSTSHA PSGSSSSASF PLFSHQQLGY FRQPTNQNLN  360
SGDGGSDLPP TPPSWSDSSH YRSSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149154ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-15ERF family protein