PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023896588.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 290aa MW: 33084.3 Da PI: 7.428

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023896588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	7.1e-50	20	146	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv +yL++kv++k++ l + ik++diyk++PwdLp + + +ekewyfF++r kky+++ r+nr+t sg+Wkatg dk+++s XP_023896588.1 20 LPGFRFHPTDEELVGFYLQRKVDKKPICL-DLIKHIDIYKHDPWDLP-TGSVGEKEWYFFCRRGKKYKNSVRPNRVTGSGFWKATGIDKAIYSVk 112 69**********************999.99***********.4456899*********************************975 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e +glkk+Lv+y+g+a kg+ktdW+mhe+rl XP_023896588.1 113 ePHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 146 45566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MEVKKMSALV NGGKDDEDFL PGFRFHPTDE ELVGFYLQRK VDKKPICLDL IKHIDIYKHD 60 PWDLPTGSVG EKEWYFFCRR GKKYKNSVRP NRVTGSGFWK ATGIDKAIYS VKEPHECIGL 120 KKSLVYYRGS AGKGTKTDWM MHEFRLPASK STNPSVTKNT TQEAEVWTLC RILKRDVSYK 180 KWQEISSKPS LTDSSCTTSC SSESNIDRDR YLNFGASAAM ENERKHFSDI YEGNQFSAGQ 240 LSLTGEVPYM ASCVSDLNPS GDDYSKEGNW DELMPIVEFA NDPSMLYSFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	6e-82	NAC family protein