PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023896380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 300aa MW: 34608.6 Da PI: 6.5855 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.3 | 3.1e-17 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ G g+W++ a++ g++Rt+k+c++rw++yl XP_023896380.1 20 RGPWTLEEDTLLIHYIAHNGEGRWNLLAKRSGLRRTGKSCRLRWLNYL 67 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48 | 2.9e-15 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ +++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_023896380.1 73 RGNLSPQEQLLILELHCKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MSTCSKSISS SSEDDSELRR GPWTLEEDTL LIHYIAHNGE GRWNLLAKRS GLRRTGKSCR 60 LRWLNYLKPD VKRGNLSPQE QLLILELHCK WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK 120 QARHLKIDTN SVAFQDIIRN YWMPRLLQRI EESSSSGVLF QNSAIPQPLD SAYQHSVTTA 180 PAQVVMQGPL RLSETIQSLG HHEQNPESES MNVLQIPQLS ECPTSHFHAK VNNDDGTFVK 240 DYYYADNNSY DMEAFNLESI SPLENFEDSS SKSHVVENNW ADNDFSGSMW NMDGLWQIRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 3e-83 | MYB family protein |