PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896297.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 306aa    MW: 33466.7 Da    PI: 6.3038
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-20179227355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+W+AeIrdp+    + +r++lg+f taeeAa+a+++a+ +++g
  XP_023896297.1 179 FRGVRQRP-WGKWAAEIRDPR----KaTRVWLGTFTTAEEAARAYDRAAIEFRG 227
                     8*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MYNPSFKRAK VTQTPITQHS FTPPPMPPHQ QHRLSTEDEL SVMVAALTNV VSGSSSATAT  60
VTDNQQFYDY PWQPSPPPPP PHPTFDGAAA ASASSTTSTG TDCTDTFLPP SSELDTCHVC  120
NINGCLGCNF FPPPPTQQNT NTDHHGQHQQ EKKIEVSSGS ASGSSKKTQQ KQQRVKKNFR  180
GVRQRPWGKW AAEIRDPRKA TRVWLGTFTT AEEAARAYDR AAIEFRGPRA KLNFPFSDYT  240
AAIPSNSSDF MTTAENSAEI EVTNLIGNGN QDNNFVDGQW DEWMMTLMNG GDSSDSAGNT  300
SNALSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-30ERF family protein