PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895839.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 316aa    MW: 35348.1 Da    PI: 6.9682
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.36.4e-171462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lvd +k+ Gg+ +W++ ++  g+ R++k+c++rw +yl
   XP_023895839.1 14 KGPWTPEEDQILVDFIKKNGGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62
                     79*******************9***********99************97 PP
2Myb_DNA-binding51.42.4e-1668113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE++l ++++  lG++ W+tIa+ ++ gRt++++k+ w+++l
   XP_023895839.1  68 RGPFTQEEEKLVIQLHGILGNR-WATIASQLP-GRTDNEIKNLWNTHL 113
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGRAPCCDKK GLKKGPWTPE EDQILVDFIK KNGGHGSWRS LPKLAGLLRC GKSCRLRWTN  60
YLRPDIKRGP FTQEEEKLVI QLHGILGNRW ATIASQLPGR TDNEIKNLWN THLKKRLMGM  120
GLDPQTHELI TSCSTTVKAP ASPITRHMAQ WESARLEAEA RLSRESSLFN PIPLGKTDSD  180
YFLRIWNSKI GESFRKFNRE DKTACQSPVS QASSSTKCGS ISAITTEISP ILLGSSIAGS  240
NQNEDNECKS CKSYPEEMMV GYDTSSSDEL EDSSDSAFQM LLDFPINNDM SFLEEDINKY  300
STPPAMLTEN SFICPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-126MYB family protein