PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895616.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 264aa    MW: 28862 Da    PI: 5.6766
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.6e-11147194455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_023895616.1 147 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 194
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDPPAMMNEG SSYNLAEIWQ LPPMNGGGGM VMGLSRPQFG DVNGATNREV SGNDPMSLDQ  60
RGVHGGNGGG SRKRRDLEDD SSNSNGANDC EGKRLKTPGS GDENLDSKAE AEPSSGKHVE  120
QNTQTPPEPP KQDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV PGCNKVIGKA  180
LVLDEIINYI QSLQHQVEFL SMKLEAVNTR MTPGLEVFPS KDFGQQTFDT SGMAFGSQAP  240
REYTRSSSPE WLHMQVGGGF ERTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17296RKRRDLEDDSSNSNGANDCEGKRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.18e-98bHLH family protein