PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895349.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 367aa MW: 41877.6 Da PI: 10.0073

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	2e-18	139	226	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k++++s+v + +l lp kf+e+h +k + ++++ledesg ++e k+i + + + l++GW+ F+ +++L++gD +vF+l++ +f ++ XP_023895349.1 139 FVKTMVRSHVYSCFWLGLPSKFCEDHL-PK-TLFDMVLEDESGAEYEAKYI--GER--TGLSGGWRAFALEHKLDDGDALVFELIEPARF--KIY 225 89********************995.44.568************4..444..33*********************9986666..554 PP E CS B3 96 v 96 + XP_023895349.1 226 I 226 4 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MAKTCIDNSY EALRNQRLEL NKKKFEDLGI LKISKSLGEL TNSEKKSQQR LPKLRSKTTI 60 VSEPRRSSRA RNPVSSYRDD IDIGITHLRK RSRSRSTSYG SYLARPIEEV KEATQRQRQR 120 ALEAAVELQN NLKSENPSFV KTMVRSHVYS CFWLGLPSKF CEDHLPKTLF DMVLEDESGA 180 EYEAKYIGER TGLSGGWRAF ALEHKLDDGD ALVFELIEPA RFKIYIIKAF PLSIQEKIEV 240 TVDKEEIEDT VDKEEISATK RKSKASTKLD LQPIQTRKSK KAMVHASDNL ASPQKLHPDS 300 ETDSGDKSRD ENPTKKNECV SQNCQKKGQS VDSSEIKKLK IDENSNGCAL QKRRKKPAPK 360 LLRRKAY

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MAKTCIDNSY EALRNQRLEL NKKKFEDLGI LKISKSLGEL TNSEKKSQQR LPKLRSKTTI  60
VSEPRRSSRA RNPVSSYRDD IDIGITHLRK RSRSRSTSYG SYLARPIEEV KEATQRQRQR  120
ALEAAVELQN NLKSENPSFV KTMVRSHVYS CFWLGLPSKF CEDHLPKTLF DMVLEDESGA  180
EYEAKYIGER TGLSGGWRAF ALEHKLDDGD ALVFELIEPA RFKIYIIKAF PLSIQEKIEV  240
TVDKEEIEDT VDKEEISATK RKSKASTKLD LQPIQTRKSK KAMVHASDNL ASPQKLHPDS  300
ETDSGDKSRD ENPTKKNECV SQNCQKKGQS VDSSEIKKLK IDENSNGCAL QKRRKKPAPK  360
LLRRKAY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	95	KRSRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	1e-60	B3 family protein