PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895005.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 911aa MW: 103685 Da PI: 7.0919

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	87.8	9.1e-28	29	85	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK vkg+e+prsYY+Ct gC+v+k ve+s +++ +i+Yeg+Hnhe XP_023895005.1 29 DDGYRWRKYGQKLVKGNEYPRSYYKCTCVGCNVRKWVEQSP-AGEIPKIKYEGKHNHE 85 8**************************************.9************8 PP
2	WRKY	81.6	8.2e-26	119	176	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +Dgy+Wr YG+K+vk se+prsYY+Ct+++C +kkkve+s+ ++ +ei+Y+g+Hnh+k XP_023895005.1 119 EDGYKWRIYGKKKVKRSEYPRSYYKCTYPNCLAKKKVECSH-AGHKIEIVYKGTHNHPK 176 7*************************************9.9999*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MESSKASHSN KKYQDSEPTV VVANPFNSDD GYRWRKYGQK LVKGNEYPRS YYKCTCVGCN 60 VRKWVEQSPA GEIPKIKYEG KHNHEMPNKL AKESSDLQYL AENMNIQSQL ETKSDCEEED 120 GYKWRIYGKK KVKRSEYPRS YYKCTYPNCL AKKKVECSHA GHKIEIVYKG THNHPKPQPS 180 IKRAKEGSDL SENINSQAKP DLGLQSQAGN WNKSSQVVPA YTVPERDQES TQTALTQITG 240 SRDSEGVGDA ETIEEGNGPN PKRRMKNAGT SEVPLSHKTV AEPKIMVGKG NPHQDKNGEK 300 QIASEPHGMV FNVEPVKMTI SSEQKKIEIG EIENLASQER QPERIKVGEM QPQPLSTQGV 360 VFDDGAVKIL KSNGQLESQI VDIEMEPEAS EQCGLFLMQG GLGLTKPPKD DDWKNAKEIY 420 LMDNELSILP ENPRCPNLSA LFLPRNYKLR MIPLSFFDYM PALQILNLSR TGIKSLPDSL 480 IRLVSLKRLF LNDCHRLMTL SPKVGNLKLL EVLDLEGAKI MDLPMEIKEL TNLKCLEVSF 540 YGYMSNGRRA MQSNAVVPFG VISALSQLEE LNIDVNPDDK RWDACVEDIV TEVCTLTRLE 600 TLKFYFPRVE LLRHFHCNRP LLSHFRFTVG RHVKRIMSRV PRDVEFELER WERCLRYING 660 VGVPRDTKNV LQHVTAFFLD RHVTVKKLSD FGTRNMKQLK CCVVGECNEV QVIIDAQDAY 720 GEDGISEIES ESYDAEKIVL GSLEYLYIYY MKSLRSIWEG SVQKNSLFLL KSLTLRTCPQ 780 LTTIFTQGLL ANLFNLEEIK VEDCPSIKSI VSCEISAEHR SSYSLPNLKK ITLHYMPGLI 840 SISNGLQIAP KLEWLSFYNC PNLKNPLIDE ISSQDLKKIK GERSWWEALE WSSSCPSYLE 900 EIFVPIDIQD C

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MESSKASHSN KKYQDSEPTV VVANPFNSDD GYRWRKYGQK LVKGNEYPRS YYKCTCVGCN  60
VRKWVEQSPA GEIPKIKYEG KHNHEMPNKL AKESSDLQYL AENMNIQSQL ETKSDCEEED  120
GYKWRIYGKK KVKRSEYPRS YYKCTYPNCL AKKKVECSHA GHKIEIVYKG THNHPKPQPS  180
IKRAKEGSDL SENINSQAKP DLGLQSQAGN WNKSSQVVPA YTVPERDQES TQTALTQITG  240
SRDSEGVGDA ETIEEGNGPN PKRRMKNAGT SEVPLSHKTV AEPKIMVGKG NPHQDKNGEK  300
QIASEPHGMV FNVEPVKMTI SSEQKKIEIG EIENLASQER QPERIKVGEM QPQPLSTQGV  360
VFDDGAVKIL KSNGQLESQI VDIEMEPEAS EQCGLFLMQG GLGLTKPPKD DDWKNAKEIY  420
LMDNELSILP ENPRCPNLSA LFLPRNYKLR MIPLSFFDYM PALQILNLSR TGIKSLPDSL  480
IRLVSLKRLF LNDCHRLMTL SPKVGNLKLL EVLDLEGAKI MDLPMEIKEL TNLKCLEVSF  540
YGYMSNGRRA MQSNAVVPFG VISALSQLEE LNIDVNPDDK RWDACVEDIV TEVCTLTRLE  600
TLKFYFPRVE LLRHFHCNRP LLSHFRFTVG RHVKRIMSRV PRDVEFELER WERCLRYING  660
VGVPRDTKNV LQHVTAFFLD RHVTVKKLSD FGTRNMKQLK CCVVGECNEV QVIIDAQDAY  720
GEDGISEIES ESYDAEKIVL GSLEYLYIYY MKSLRSIWEG SVQKNSLFLL KSLTLRTCPQ  780
LTTIFTQGLL ANLFNLEEIK VEDCPSIKSI VSCEISAEHR SSYSLPNLKK ITLHYMPGLI  840
SISNGLQIAP KLEWLSFYNC PNLKNPLIDE ISSQDLKKIK GERSWWEALE WSSSCPSYLE  900
EIFVPIDIQD C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01080.1	6e-34	WRKY family protein