PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894701.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 393aa    MW: 43510.3 Da    PI: 7.8608
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894701.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.94.1e-28218278259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqKe+ gs++pr+Y+rCt++   +Cp+kk v+r +edp ++e+tY+g+H+++
  XP_023894701.1 218 EDGFTWRKYGQKEILGSKYPRGYFRCTHQklyQCPAKKLVQRLDEDPYMFEVTYRGSHTCH 278
                     7****************************9999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MFKSKTNXAR EKLSREKNLR XTMEETNTIS IIRQGCKLAR ELEANLPNLT EQQHNMLLTP  60
CVEIIKVFNT ARERLCTTQY QDPMSHTPMN MLIRQPQESQ QTQIEAAADL QGWLRSNYSQ  120
AMDIFQLQLQ ADQSRNPFET QKLGSDVHVA AAGRDHAEAP ARSRSIGGGE FPVPPIDVSD  180
SGTGNSSSQR QRRRRDDGER RTLTVPVPRI GNTEIPPEDG FTWRKYGQKE ILGSKYPRGY  240
FRCTHQKLYQ CPAKKLVQRL DEDPYMFEVT YRGSHTCHMS STAPSIPPPP DQISHDIAQF  300
MASQPLPSSS VPLSSWLSMD SLGRGGSGMA IGGGGGSGSG AGPSTTRSGK EVEFPVADMA  360
DVMFNSGSSS SNSMDFLFQA PEDVKWKPGD KQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.11e-49WRKY family protein