PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894640.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 179aa    MW: 19497.5 Da    PI: 6.6269
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-171565155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr++k +g+Wv+eIr+p   g +  r +lg++ tae Aa a++ a  +l++
  XP_023894640.1 15 KKYKGVRQRK-WGKWVSEIRVP---G-TqERLWLGSYSTAEAAAMARDVAFYCLHK 65
                    59*******9.**********8...3.35*********************999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MSCSSEENGA STSQKKYKGV RQRKWGKWVS EIRVPGTQER LWLGSYSTAE AAAMARDVAF  60
YCLHKPSTLE KLNFPSMLPS CSLRTDLSPR SVQKAASDAG MAIDAQLITE RLPESNERKK  120
FDHGHGHGHG HSGGGGDGGH GLGTGFWENG GDNNYGTTSW QGSEFKEEEG LSISIEDYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-47ERF family protein