PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT1G22810.1 | ||||||||
Common Name | ERF019, T22J18.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | ERF | ||||||||
Protein Properties | Length: 144aa MW: 15816.5 Da PI: 6.506 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53 | 8.3e-17 | 12 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykG+r++k +g+Wv+eIr+p + r r +lg+f tae+Aa a++ a +l++ AT1G22810.1 12 SKYKGIRRRK-WGKWVSEIRVPGT---RDRLWLGSFSTAEGAAVAHDVAFFCLHQ 62 89*****998.**********943...5*********************999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.83E-17 | 12 | 73 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.2E-8 | 12 | 60 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.93E-28 | 12 | 74 | No hit | No description |
PROSITE profile | PS51032 | 21.549 | 13 | 72 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.7E-33 | 13 | 78 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.6E-25 | 13 | 73 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.8E-9 | 14 | 25 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.8E-9 | 36 | 52 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0000293 | anatomy | guard cell |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MDYRESTGES QSKYKGIRRR KWGKWVSEIR VPGTRDRLWL GSFSTAEGAA VAHDVAFFCL 60 HQPDSLESLN FPHLLNPSLV SRTSPRSIQQ AASNAGMAID AGIVHSTSVN SGCGDTTTYY 120 ENGADQVEPL NISVYDYLGG HDHV |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
Genevisible | 264202_at | 0.0 | ||||
Expression Atlas | AT1G22810 | - | ||||
AtGenExpress | AT1G22810 | - | ||||
ATTED-II | AT1G22810 | - |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
TAIR | encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Function -- GeneRIF ? help Back to Top | ||||||
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00158 | DAP | 27203113 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT1G22810.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT1G22810 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF325106 | 0.0 | AF325106.1 Arabidopsis thaliana hypothetical protein (T22J18.2) mRNA, complete cds. | |||
GenBank | BT024683 | 0.0 | BT024683.1 Arabidopsis thaliana At1g22810 mRNA, complete cds. | |||
GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. | |||
GenBank | T22J18 | 0.0 | AC003979.2 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_173695.1 | 1e-105 | Integrase-type DNA-binding superfamily protein | ||||
Swissprot | O80542 | 1e-106 | ERF19_ARATH; Ethylene-responsive transcription factor ERF019 | ||||
TrEMBL | A0A178WCH7 | 1e-103 | A0A178WCH7_ARATH; Uncharacterized protein | ||||
STRING | AT1G22810.1 | 1e-105 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3865 | 28 | 60 | Representative plant | OGRP6 | 16 | 1718 |
Link Out ? help Back to Top | |
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Phytozome | AT1G22810.1 |
Entrez Gene | 838887 |
iHOP | AT1G22810 |
wikigenes | AT1G22810 |