PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023894512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 204aa MW: 23461.8 Da PI: 10.9459 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85 | 4.3e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELS+LCdaeva++ifs++gk y ++s XP_023894512.1 9 KRIENPTSRQVTFSKRRNGLLKKAFELSILCDAEVALVIFSPSGKGYQFAS 59 79*********************************************9986 PP | |||||||
2 | K-box | 70.2 | 6.3e-24 | 79 | 171 | 7 | 99 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++++ +e +++e++ Lk+ ++ L+ + h GedL+sL +keL+qLe+q ++++++R+kK +++ e+i+ +++k+++lqeen L+++l XP_023894512.1 79 IDQHSRPMEFWRTEIEELKRSVDILEARLSHSAGEDLSSLGMKELRQLERQTRTAVERVRAKKRRIISENINLMKRKQRALQEENSHLQRRLH 171 457788899********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MGRGKVELKR IENPTSRQVT FSKRRNGLLK KAFELSILCD AEVALVIFSP SGKGYQFASH 60 DMNRTIARYR SEVGLPQSID QHSRPMEFWR TEIEELKRSV DILEARLSHS AGEDLSSLGM 120 KELRQLERQT RTAVERVRAK KRRIISENIN LMKRKQRALQ EENSHLQRRL HELHDTNVSS 180 KISGQTASSC NISNPRVLQD GVVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-46 | MIKC_MADS family protein |