PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894184.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 575aa MW: 62221.9 Da PI: 7.9655

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894184.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.7	4.2e-32	217	274	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k XP_023894184.1 217 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 274 8**************************************.*************85 PP
2	WRKY	106.2	1.6e-33	390	448	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023894184.1 390 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 448 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MELRLLTATT STSTSTSSNN TSSSADVAAP PEDPTRNKET TASASAAAAA AAANAKYRRM 60 SPAKLPISRS TCLTIPPGLS PTSFLESPVL LSNMKAEPSP TTGSFMKTHM MHGPIGSTNP 120 VPADLNQQRS EQSVQAQGQC QPQAFASSPS VKKEMAVSSN ELSLASPGHM VTSGAIVPVE 180 VDTDEPNQRG TSNTGVQASQ FDHKGSGPSV IAERPSDDGY NWRKYGQKLV KGSEFPRSYY 240 KCTHPNCEVK KLFERSHDGQ ITEIIYKGTH DHPKPQPSRR YTAGAIMAVQ EERSDKALSL 300 NGRDERSGMF GQTSHTVEPN STPDRSPVAV NDDSLDGGSM PNRIHDEADD DDPFSKRRKM 360 DIGGVDVTSV VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP RSYYKCTNAG 420 CPVRKHVERA SHDPKAVITT YEGKHNHDVP TARTSSHDIA GPTAVSGPLR IRSEENDNVS 480 LDLGVGINSA VENRSNEHRQ THHSDIRGSQ THASSSHYNV VQATPVMTYF GVLNTGMSQY 540 GSRGNPSESL NIGIPPLNHS SYPFPQNMGK ILTGP

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MELRLLTATT STSTSTSSNN TSSSADVAAP PEDPTRNKET TASASAAAAA AAANAKYRRM  60
SPAKLPISRS TCLTIPPGLS PTSFLESPVL LSNMKAEPSP TTGSFMKTHM MHGPIGSTNP  120
VPADLNQQRS EQSVQAQGQC QPQAFASSPS VKKEMAVSSN ELSLASPGHM VTSGAIVPVE  180
VDTDEPNQRG TSNTGVQASQ FDHKGSGPSV IAERPSDDGY NWRKYGQKLV KGSEFPRSYY  240
KCTHPNCEVK KLFERSHDGQ ITEIIYKGTH DHPKPQPSRR YTAGAIMAVQ EERSDKALSL  300
NGRDERSGMF GQTSHTVEPN STPDRSPVAV NDDSLDGGSM PNRIHDEADD DDPFSKRRKM  360
DIGGVDVTSV VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP RSYYKCTNAG  420
CPVRKHVERA SHDPKAVITT YEGKHNHDVP TARTSSHDIA GPTAVSGPLR IRSEENDNVS  480
LDLGVGINSA VENRSNEHRQ THHSDIRGSQ THASSSHYNV VQATPVMTYF GVLNTGMSQY  540
GSRGNPSESL NIGIPPLNHS SYPFPQNMGK ILTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein