PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894039.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 260aa    MW: 29667.8 Da    PI: 8.6614
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.42.9e-2897156159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ k+++ pr+Y+rC++a  C++kkkv+r+ ed+++++ tY geHnhe
  XP_023894039.1  97 VKDGYQWRKYGQKVTKDNQSPRAYFRCSMApICRAKKKVQRCMEDKSILVATYDGEHNHE 156
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEPHISYKEK VETLQEYLER LRKENETLRF MLSAMNTKCN ILQARLQEMK VEQMEINLPQ  60
SGSIYETKKR ARTEIPIQTK TRQIFVRTDS KDTSLIVKDG YQWRKYGQKV TKDNQSPRAY  120
FRCSMAPICR AKKKVQRCME DKSILVATYD GEHNHEAHGS LGDSSSSSDI VNTGSIANVI  180
SPLCMAYNNP FQPAIALDLS LSMPNQENRI PFQNFVEDYH SNYNKIEEYV ATLTKDPNFT  240
AALAAAVANS IADQPKISKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-42WRKY family protein