PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894037.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 305aa    MW: 34099 Da    PI: 7.574
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-30149208159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rsaedp+++++tYegeHnh+
  XP_023894037.1 149 VQDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSAEDPSFLVVTYEGEHNHH 208
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MSSKTASTMD SRCLDTSLDL NLGTLGHMKE EETPYEKAGL LVEELHRMSS ENKKLTEMLV  60
HLCENYNAFQ SHLKDLKSKH SEQESMDSRK RKAERDYHGN MIGINGNNEC SSSDDHEESR  120
KRPKEETIKT KVKRFCVRSS DTSNNSLPVQ DGYQWRKYGQ KVTRDNPSPR AYFKCSFAPS  180
CPVKKKVQRS AEDPSFLVVT YEGEHNHHKN PSQVEVSLGL SQCENLESPS ISASMRSSAP  240
TTVTLDLVQP GGLHDSAKKS NQGVESPAFQ QFLVQQMASS LTKDPNFTSA LAAAISGRIL  300
DYTTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-76WRKY family protein