PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023893046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 21426.1 Da PI: 8.9429 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 43 | 93 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr+p++ + r++lg+f +e+Aaka++ a+ +l+g XP_023893046.1 43 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPIPEMAAKAYDVAAHCLKG 93 68*****887.**********843...6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MEQLPYTEDD TTTTTTSTTT TTSTTSTTST TSPQSQRSGT RHPVYRGVRK RRWGKWVSEI 60 REPRKKSRIW LGSFPIPEMA AKAYDVAAHC LKGRKAQLNF PDEVEHLPRP STCTARDIQA 120 AAAKAAHMMA SEITKKKNIK SKKSHVVNSD ADDFWAEIEL PELMISGSCG WSFTSDGATW 180 PDGDVAQPFM ACL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01250.1 | 2e-61 | ERF family protein |