PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023893003.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 228aa    MW: 25658.1 Da    PI: 10.8786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023893003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99e-12105146351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_023893003.1 105 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 146
                     79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVSLRRRKLL GLCSGKSSFI APLPRFFNGI APEISTHNSN HVRVHPVAPA NVNQPVGNRI  60
GPGSSNGSGS SSSKEQPIQP VAGPPIKRRK RHRRKHFQNQ EPCLMRGVYF KNMKWQAAIK  120
VDKKQIHLGT VGSQEEAARL YDRAAFMCGR EPNFELSEEE KQELRKFKWE EFLAITRHAI  180
TSKKHKRRLG AGSQRRSESP LQNSDWDGKP EVNGHSTSED MEPDTSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.15e-48ERF family protein