PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891849.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 284aa    MW: 31680.5 Da    PI: 5.0853
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.61.7e-1632120198
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffkv+    +   + l++p kfa+    ++   +++  led+sg++W v++  +k +g++ +++GW++F  ++gL+ gDf+vF ++g s f  vv
  XP_023891849.1  32 FFKVM--IGAKFAQVLYFPPKFAAMVpALV---NQKTFLEDSSGQQWLVTI--SKVDGSIAFQQGWNSFSLDHGLEIGDFLVFNYVG-SHF--VV 116
                     56666..4444556699******8887655...34699*************..********************************99.888..88 PP

                     EEE- CS
              B3  95 kvfr 98 
                     +++ 
  XP_023891849.1 117 SIYT 120
                     8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGGKVEACVE CTQKCLKIHE KKKISLPAVT SFFKVMIGAK FAQVLYFPPK FAAMVPALVN  60
QKTFLEDSSG QQWLVTISKV DGSIAFQQGW NSFSLDHGLE IGDFLVFNYV GSHFVVSIYT  120
KSGCEKLDFP WNNNPKKRAR ANGNSTGKRS QRHTIDEDSM NKQGTSTSAV PMSDEEISPS  180
QCKTNDLEEI LEVPENPSDH MDTIEKNPSD HKETIERPKP MPESEYYEDT YYMINRDVGG  240
KQRDDIMFDL SGFEMGNNSG ADGTKNAAAK DVGCSTSQRF LPED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-15B3 family protein