PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023891148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 32984.7 Da PI: 9.5877 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.5e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed++l++++k +G g W+ +++ g++R++k+c++rw++yl XP_023891148.1 13 RGAWSAWEDKILKNYIKIHGEGKWTDLPQRAGLRRCGKSCRLRWLNYL 60 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56 | 9.2e-18 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++k+lG+ W++Iar+++ gRt++++k++w++ XP_023891148.1 66 RGNFSEDEEDLIIKLHKLLGNS-WSLIARRLP-GRTDNEIKNYWNTI 110 89******************99.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MERRPCSAKG VIRGAWSAWE DKILKNYIKI HGEGKWTDLP QRAGLRRCGK SCRLRWLNYL 60 RPDIKRGNFS EDEEDLIIKL HKLLGNSWSL IARRLPGRTD NEIKNYWNTI LSKRVQGDKI 120 HEQSSRILKS IRRIRKSTSE SNLGKKPVAH PVIRPKAMRC TKVILPWQPD NNQMFNENIV 180 PYGNSENLFP SVQPENNISD FLKDLDINYL LRSDMQNLDG HQTNEINVRN IVLDLPVSGC 240 DAKLKDLMDE GKPENWRATN PFQPNEAMDL NTLASFLDLE DAWIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 2e-53 | MYB family protein |