PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023890064.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 252aa MW: 28741.2 Da PI: 6.5137

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023890064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.7e-15	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed +l + v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_023890064.1 10 RGPWTEQEDFKLNCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 57 89********************************************97 PP
2	Myb_DNA-binding	53.1	7.4e-17	64	108	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ XP_023890064.1 64 GKMTPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 108 789****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MKMVQEGIRR GPWTEQEDFK LNCFVGLFGD RRWDFIAKVS GLNRTGKSCR LRWVNYLHPG 60 LKQGKMTPQE ERLVLELHSK WGNRWSRIAR KLPGRTDNEI KNYWRTHMRK KAQEEKQAMS 120 PSPSSSNCSS SSPSNPIVES LPFTETGEKS FHDAGGPDIK ASAEKQVEEE QGGEKGYSMD 180 DIWKDIKNTL IPGNDGYTEE GSSFPCPTLD FPTWDQYHSE SPWTMAEESK MFLPACDHLF 240 PCSDYGTAYL SG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	1e-81	MYB family protein