PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023887917.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 571aa    MW: 63928.4 Da    PI: 7.0808
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023887917.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.26.3e-1832121199
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffkv+       s+ l lp kfa+++  ++   +++  led+sgr+W+v++  +  +g+  +++GW++F  ++gL+ gDf+vF ++g s f  vv
  XP_023887917.1  32 FFKVM--IGDQFSKVLFLPPKFAATIsALV---NQKTFLEDSSGRQWKVTI--SIVDGSLAFQRGWSSFSLDHGLEIGDFLVFNYMG-SHF--VV 116
                     67777..444555669**********6555...34699*************..8889999*************************98.788..89 PP

                     EEE-S CS
              B3  95 kvfrk 99 
                      +++k
  XP_023887917.1 117 NIYNK 121
                     88876 PP

2B337.54.3e-125075713199
                     .--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        k + l+d++ + W v +    +++  +l++GW++F +an++++gD +vF+l+  se+ +vv+++rk
  XP_023887917.1 507 MDRKVVYLRDSDMKLWPVLY--HERPNLKLLASGWESFSEANKIQTGDECVFSLE--SEGIYVVQIIRK 571
                     4456899*************..999999*************************85..577789999885 PP

Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    
MGGKVEACVE CTRKCLLIHK KKKNSSPVVT SFFKVMIGDQ FSKVLFLPPK FAATISALVN  60
QKTFLEDSSG RQWKVTISIV DGSLAFQRGW SSFSLDHGLE IGDFLVFNYM GSHFVVNIYN  120
KTGCEKLLFP ENSSPKKRAR TNCNSTAKPS QWHTNDEDSM NKQGSSTSAV SMSGAEISQS  180
QCTMEVPENP SNHEHIIQRP KPTSTAEYCE ETYYMIDRDV GDRQDDRSSM LDLSKFEMKN  240
INSVADVTKK SAAKDVRSST SQMFLTETCL FDKDPVTSGT VSKVGNIDAS EIERSHFFEK  300
LEKKPSLPDK SFCNDNTSGH LFTTSAVMLD KNKERISDIL NTKCQIAGES ESLTLKNQVF  360
MSSKEHALLN DIDSCRSAAQ KFIAMSESFG VPNNFDRRNC QTGELIKNLK KEAVEITTDL  420
RSHKERGGQE IYGKESKVIK EELIQHADTI VRDNDIGLRM VKAEPVDSIG ISSLNTASTS  480
SLVATENNSF LELSTCLPYS SKGRVRMDRK VVYLRDSDMK LWPVLYHERP NLKLLASGWE  540
SFSEANKIQT GDECVFSLES EGIYVVQIIR K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135141PKKRART
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.16e-15B3 family protein