PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023887917.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | B3 | ||||||||
Protein Properties | Length: 571aa MW: 63928.4 Da PI: 7.0808 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56.2 | 6.3e-18 | 32 | 121 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv+ s+ l lp kfa+++ ++ +++ led+sgr+W+v++ + +g+ +++GW++F ++gL+ gDf+vF ++g s f vv XP_023887917.1 32 FFKVM--IGDQFSKVLFLPPKFAATIsALV---NQKTFLEDSSGRQWKVTI--SIVDGSLAFQRGWSSFSLDHGLEIGDFLVFNYMG-SHF--VV 116 67777..444555669**********6555...34699*************..8889999*************************98.788..89 PP EEE-S CS B3 95 kvfrk 99 +++k XP_023887917.1 117 NIYNK 121 88876 PP | |||||||
2 | B3 | 37.5 | 4.3e-12 | 507 | 571 | 31 | 99 |
.--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 k + l+d++ + W v + +++ +l++GW++F +an++++gD +vF+l+ se+ +vv+++rk XP_023887917.1 507 MDRKVVYLRDSDMKLWPVLY--HERPNLKLLASGWESFSEANKIQTGDECVFSLE--SEGIYVVQIIRK 571 4456899*************..999999*************************85..577789999885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 571 aa Download sequence |
MGGKVEACVE CTRKCLLIHK KKKNSSPVVT SFFKVMIGDQ FSKVLFLPPK FAATISALVN 60 QKTFLEDSSG RQWKVTISIV DGSLAFQRGW SSFSLDHGLE IGDFLVFNYM GSHFVVNIYN 120 KTGCEKLLFP ENSSPKKRAR TNCNSTAKPS QWHTNDEDSM NKQGSSTSAV SMSGAEISQS 180 QCTMEVPENP SNHEHIIQRP KPTSTAEYCE ETYYMIDRDV GDRQDDRSSM LDLSKFEMKN 240 INSVADVTKK SAAKDVRSST SQMFLTETCL FDKDPVTSGT VSKVGNIDAS EIERSHFFEK 300 LEKKPSLPDK SFCNDNTSGH LFTTSAVMLD KNKERISDIL NTKCQIAGES ESLTLKNQVF 360 MSSKEHALLN DIDSCRSAAQ KFIAMSESFG VPNNFDRRNC QTGELIKNLK KEAVEITTDL 420 RSHKERGGQE IYGKESKVIK EELIQHADTI VRDNDIGLRM VKAEPVDSIG ISSLNTASTS 480 SLVATENNSF LELSTCLPYS SKGRVRMDRK VVYLRDSDMK LWPVLYHERP NLKLLASGWE 540 SFSEANKIQT GDECVFSLES EGIYVVQIIR K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 141 | PKKRART |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 6e-15 | B3 family protein |