PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023886903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 291aa MW: 32469.6 Da PI: 7.1662 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.6 | 1.6e-19 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd+llv++++++G g+W+t +++ g+ R++k+c++rw +yl XP_023886903.1 17 RGAWSPEEDQLLVQYINKHGHGSWRTLPKHAGLLRCGKSCRLRWINYL 64 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.2e-17 | 70 | 115 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ ++++ +lG++ W++Ia+ m+ gRt++++k++w+++l XP_023886903.1 70 RGPFTAEEEDSIIQLQGMLGNR-WAAIASQMP-GRTDNEIKNYWNTHL 115 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MVKMGRAPCC DKDGVKRGAW SPEEDQLLVQ YINKHGHGSW RTLPKHAGLL RCGKSCRLRW 60 INYLRPDIKR GPFTAEEEDS IIQLQGMLGN RWAAIASQMP GRTDNEIKNY WNTHLKKRSL 120 CSVPSPWVHK PSSKPETSIV KSESSSTRHM VQWESARVEA EARMSMELSL LDSSSMIKTE 180 CDYFLRLWSS EVGESFRKVN GKDGVVCQSH VSPKSSSTKC GSGSDVTIQA INTGTSACTN 240 MKPEQADSYK PKVEDVMATS DSHTSYDLID SSDSALELLL DFPDGEDSFQ V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 5e-93 | MYB family protein |