PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023886853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 701aa MW: 77899.5 Da PI: 8.2086 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.5 | 0.00045 | 75 | 96 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C+ F ++ n++rHir+H XP_023886853.1 75 KCDKCSLEFCSPINYRRHIRVH 96 7********************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 701 aa Download sequence |
MPVVKPKSSS SLELMKSEGN DSSDTIIRQA IKEPLLSFSR PGESPVQLIQ LLHALDQQEL 60 PGWPLLTPLK VQMQKCDKCS LEFCSPINYR RHIRVHHRLK KLDKDSTKNR DLLGAFWDKL 120 SLEEAKEVVS FKNVTLEGVP GSSIVKSLTT LTRKPGFSTL PQVYLRAGSA LLDIIQARPL 180 RFPISAQELF GILDVASENT FLCGTAGLMQ KYIFDGEAGK IGLETKNLVA CTSFLVEQKL 240 VKAWLADQDA EALRCQKLLV EEEEAAQKRK TELLERKRQK KLRQKEQKAK EQKHGEKVDV 300 VGFIDNTSEA MPVPQEETCS PSAACDSDTS VPEMLPDQAP SSSEAFRHTN SDEEAGPDSQ 360 SGYGFEYAEP GISQNFERRM VHGSVRRHVT VARWQVPPKS QRAVPNGFHS GQNSQASKLG 420 VVQKHGIHRD LRAAPVANGN KVWSRKPKLE IDGEILKARV QKEAINQPDQ IKNREVLIGS 480 ICVTLRNCDQ ETNNLAGARE DCLAEHQMPK TNIQEKPIKP DSLLSGTNRS MIKLWRPVSR 540 HENKGPMPVQ NGNIESELDV TAEKDNDQNP NEGCLGSYAM DDNDGAAKES FCPGTMGFSI 600 YAAKAFLSER WKEAITADHV KLVLSPDSEP PRCPEMENDS ELVASQSSNL HKRSILGSAE 660 NRLVNAGAFD SSITRSVKEK YRAKPEKGVK KKYIPKQSNA T |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 275 | 282 | ERKRQKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25610.1 | 1e-151 | C2H2 family protein |