PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023886788.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 24290.1 Da PI: 5.2247 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.4 | 2.4e-20 | 76 | 125 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W++eIr p r kr++lg+f taeeAa+a+++a+ k++g XP_023886788.1 76 RYRGVRQRP-WGKWASEIRNP-----RvaKRVWLGTFETAEEAARAYDKAAIKFRG 125 8********.**********9.....667*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MHYIRVTKEE EHDILVSAFK HVITDGVDTH SPQQLQILES LQGSSTAASS LPSTSGASDT 60 GKKKKKKKKK DDNEKRYRGV RQRPWGKWAS EIRNPRVAKR VWLGTFETAE EAARAYDKAA 120 IKFRGPRAKL NFPLSDYEVE RDDHHDEQAQ EVNPNVNVEM MAESDTQIMK DVAESSDEEN 180 ELLDGITIKE LEQWMMYWPD NADDPTLNLN FV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 62 | 68 | KKKKKKK |
2 | 62 | 70 | KKKKKKKKK |
3 | 63 | 69 | KKKKKKK |
4 | 64 | 70 | KKKKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 3e-23 | ERF family protein |