PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023885925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 327aa MW: 37941.2 Da PI: 8.4652 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.8 | 4.3e-06 | 19 | 40 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg F+ + +Lk+H+ +H XP_023885925.1 19 TCQECGAKFTKPAYLKQHMLSH 40 6*******************99 PP | |||||||
2 | zf-C2H2 | 19 | 3.8e-06 | 46 | 70 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+Cp dC+ s++rk++L+rH+ H XP_023885925.1 46 YTCPvdDCHSSYRRKDHLTRHLLQH 70 9********************9887 PP | |||||||
3 | zf-C2H2 | 16.7 | 2.1e-05 | 75 | 100 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +Cg Fs + n++rH + H XP_023885925.1 75 FKCPieNCGHEFSYQGNMTRHVKEfH 100 89********************9988 PP | |||||||
4 | zf-C2H2 | 18.8 | 4.3e-06 | 115 | 139 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F+ s L++H +H XP_023885925.1 115 FVCQeiGCGKVFKFASKLRKHEESH 139 89*******************9988 PP | |||||||
5 | zf-C2H2 | 16.2 | 3e-05 | 206 | 230 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C +Fs+ksnL++Hi+ H XP_023885925.1 206 KCHydGCLHTFSTKSNLHQHIKAvH 230 79*******************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MEKNRVNGEE EKEGKKSNTC QECGAKFTKP AYLKQHMLSH SVERLYTCPV DDCHSSYRRK 60 DHLTRHLLQH QGKLFKCPIE NCGHEFSYQG NMTRHVKEFH SKDCPPINAE PQKQFVCQEI 120 GCGKVFKFAS KLRKHEESHV KLDSVEALCC EPGCMKYFSN EECLKSHIQS CHQHITCEIC 180 GTKQLRRNIK RHLQIHEDTV SLERVKCHYD GCLHTFSTKS NLHQHIKAVH LELKPFACSF 240 SGCGMRFAHK HVRDKHEKTG CHVHTFGDFE ESDNQFQSRI RGGRKRKCPT VEMLIRKRIT 300 PPSPPSQSDE ESDYLGWLHS QRTGNEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-125 | C2H2 family protein |