PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885433.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 342aa MW: 39091.3 Da PI: 5.9773

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00045	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_023885433.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	22.3	3.4e-07	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk Fs nL++H++tH XP_023885433.1 106 YVCHyeGCGKAFSLDFNLRSHMKTH 130 9***********************9 PP
3	zf-C2H2	17.9	8.4e-06	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H XP_023885433.1 136 HICPypDCGKRYAHEYKLKNHIASH 160 679999*****************96 PP
4	zf-C2H2	14	0.00015	199	224	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H XP_023885433.1 199 YACPyeGCEKAYIHEYKLKLHLRReH 224 89**********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MEMQFTHTLF ERRPIVKSKT PAVKWFKEWV PQDVVATGGK CFVMKWVTEE SLKALKEKAK 60 EPEPPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKAFSLD 120 FNLRSHMKTH SQENYHICPY PDCGKRYAHE YKLKNHIASH HEKNVPVDVA KYTPPSEKQN 180 KTPKPSSGVY ASASSDRPYA CPYEGCEKAY IHEYKLKLHL RREHPGHTSD ENAENAAANA 240 DNEMDEASDQ DAYGGKRVNG KSQKQSRPKP NLKLPPAKVT QRKGSTPSPA PVNVMKKAWP 300 AKEEAYEEED SEETEEDRDN VEDGWRYAEN NEDDDEETEY ED

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MEMQFTHTLF ERRPIVKSKT PAVKWFKEWV PQDVVATGGK CFVMKWVTEE SLKALKEKAK  60
EPEPPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKAFSLD  120
FNLRSHMKTH SQENYHICPY PDCGKRYAHE YKLKNHIASH HEKNVPVDVA KYTPPSEKQN  180
KTPKPSSGVY ASASSDRPYA CPYEGCEKAY IHEYKLKLHL RREHPGHTSD ENAENAAANA  240
DNEMDEASDQ DAYGGKRVNG KSQKQSRPKP NLKLPPAKVT QRKGSTPSPA PVNVMKKAWP  300
AKEEAYEEED SEETEEDRDN VEDGWRYAEN NEDDDEETEY ED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-118	C2H2 family protein