PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023885432.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 372aa MW: 42573.4 Da PI: 6.3813 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.0005 | 79 | 101 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_023885432.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP | |||||||
2 | zf-C2H2 | 16.5 | 2.4e-05 | 106 | 130 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_023885432.1 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP | |||||||
3 | zf-C2H2 | 20.7 | 1.1e-06 | 136 | 160 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk Fs nL++H++tH XP_023885432.1 136 FICPheGCGKAFSLDFNLRSHMKTH 160 78**********************9 PP | |||||||
4 | zf-C2H2 | 17.8 | 9.4e-06 | 166 | 190 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H XP_023885432.1 166 HICPypDCGKRYAHEYKLKNHIASH 190 679999*****************96 PP | |||||||
5 | zf-C2H2 | 13.8 | 0.00017 | 229 | 254 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H XP_023885432.1 229 YACPyeGCEKAYIHEYKLKLHLRReH 254 89**********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MEMQFTHTLF ERRPIVKSKT PAVKWFKEWV PQDVVATGGK CFVMKWVTEE SLKALKEKAK 60 EPEPPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFICPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE 180 YKLKNHIASH HEKNVPVDVA KYTPPSEKQN KTPKPSSGVY ASASSDRPYA CPYEGCEKAY 240 IHEYKLKLHL RREHPGHTSD ENAENAAANA DNEMDEASDQ DAYGGKRVNG KSQKQSRPKP 300 NLKLPPAKVT QRKGSTPSPA PVNVMKKAWP AKEEAYEEED SEETEEDRDN VEDGWRYAEN 360 NEDDDEETEY ED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-143 | C2H2 family protein |