PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883807.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 440aa MW: 48811 Da PI: 8.1011

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.3e-32	249	302	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023883807.1 249 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 302 9****************************************************7 PP
2	Myb_DNA-binding	46.5	8.4e-15	250	301	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023883807.1 250 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 301 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MKMPLDGIFI EPSSTPLPDL SLHISPPNPS SSSSSQICNT SNEVDTRRTT ESQAHTELSL 60 GRNFTTPNPY QQQRHLVHHH HHPNNRSNHM NHGVLDVSSD GLKPIKGIPV YQHHRSFPFL 120 PMDQVHTTRD KEAKMCYYQM PSNNPSFCTS SSSVSHAHSS PYGGGLDAMS ILSSGPNASS 180 LAAAYNRLGT ATATRFNGLS TEAFKSHQLH HHHHHNQYGV GPSEVPHGIG MMRSRFMPKL 240 PTKRSMRAPR MRWTSTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY 300 RTVKTTDKSA ASSGQSDGSG EDDISPIGSN SEPGLRPSYN DQRGPSDHRP VQQDHVLDYA 360 STTLWSNSSS NRDAWPQANS NEVEALRPAS FDSQQRSRGH HIQECDSTQL KSYLGSTLDC 420 KNPSLEFTLG RPDWQGKEHD

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MKMPLDGIFI EPSSTPLPDL SLHISPPNPS SSSSSQICNT SNEVDTRRTT ESQAHTELSL  60
GRNFTTPNPY QQQRHLVHHH HHPNNRSNHM NHGVLDVSSD GLKPIKGIPV YQHHRSFPFL  120
PMDQVHTTRD KEAKMCYYQM PSNNPSFCTS SSSVSHAHSS PYGGGLDAMS ILSSGPNASS  180
LAAAYNRLGT ATATRFNGLS TEAFKSHQLH HHHHHNQYGV GPSEVPHGIG MMRSRFMPKL  240
PTKRSMRAPR MRWTSTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY  300
RTVKTTDKSA ASSGQSDGSG EDDISPIGSN SEPGLRPSYN DQRGPSDHRP VQQDHVLDYA  360
STTLWSNSSS NRDAWPQANS NEVEALRPAS FDSQQRSRGH HIQECDSTQL KSYLGSTLDC  420
KNPSLEFTLG RPDWQGKEHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-65	G2-like family protein