PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883433.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 263aa    MW: 28644.1 Da    PI: 4.6256
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2575e-1866116155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_023883433.1  66 PVYRGVRMRA-WGKWVSEIREPRK---KNRIWLGTFSTPEMAARAHDVAALSIKG 116
                     68*****998.**********854...59**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGEGEPVNSE YESSTNSSSS TRSPSTSSSS SGLAQAQNLS EDNEMGSPDP DPKGEKKRAR  60
DSSKHPVYRG VRMRAWGKWV SEIREPRKKN RIWLGTFSTP EMAARAHDVA ALSIKGNSAI  120
LNFPELSGSL PRPTSNSPRD VQAAASKAAS MVDFDLPKTK TTSSSSSSSS STSSTNDVST  180
PEELSEIVEL PSLGTSYELS NDFVFIDSVD GWVYPPPWYH SHSQSQSQSQ SSSIDECGAY  240
FRDQITETVI PSSFDFEALS WEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-65ERF family protein