PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023881636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 303aa MW: 34073.2 Da PI: 5.7173 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 97.1 | 2.7e-30 | 19 | 158 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy 82 lppG+rFhP+++elv++yL+ k ++ + ++ + i+e+++++++P +Lp + +++++wy +++++++ r++r+tk+gy XP_023881636.1 19 LPPGCRFHPSQQELVSYYLASKNRDPDpnpdenfFNGYDLIRELNLFDYDPFELPDdtcfsyGFGGRKRHWYCYCCASSS---RIRSRRKTKNGY 110 79*********************99987666655555568**************954677665555888*******9876...4799******** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkge.ktdWvmheyrl 128 Wk gk ++v+ ++ +vg +k++vfy g++p++ +t+Wv+ ey+l XP_023881636.1 111 WKRNGKVRDVVGPcGRVQVGSRKSFVFYLGNSPETAfRTSWVLYEYAL 158 ***********9978889**********998877655*********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MGDPIPSTQK LKPTTSFSLP PGCRFHPSQQ ELVSYYLASK NRDPDPNPDE NFFNGYDLIR 60 ELNLFDYDPF ELPDDTCFSY GFGGRKRHWY CYCCASSSRI RSRRKTKNGY WKRNGKVRDV 120 VGPCGRVQVG SRKSFVFYLG NSPETAFRTS WVLYEYALAD HLKASFVVCR VFSKSRAGNS 180 ISDNGLSSCA EESVSAVRHI GIQHDGYFTP DSVEAKIQGD NSVDGNNEIP RYPMQLGSEL 240 EDQIMTRPVS VASPPFPSVM QPRELVSSTG LPGSGLMFVE GLTDRQLFSI VEEDFIELND 300 LMD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 8e-24 | NAC family protein |