PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881475.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 184aa    MW: 20733.7 Da    PI: 6.4303
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000153254123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H++ H
  XP_023881475.1 32 YECTFCKRGFTNAQALGGHMNIH 54
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MESIKQGSSE TSSEESDHLE QVRDDTGSRR SYECTFCKRG FTNAQALGGH MNIHRKDRAK  60
AKQLTSSSSH SNKSNEDCIP SRYISPVSHE PSEYFKVLEA QRQSNCHMYF QPSSASSPRH  120
PHANFHQSDF IASRSQSLSM NQDLFGVNLS LQIGPMHVED DGMKRAVSEA DELDLELRLG  180
HDPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.13e-15C2H2 family protein