PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023881426.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 350aa MW: 39817.7 Da PI: 5.4612

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023881426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.7	3.7e-17	179	275	2	96
EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +k+l++sdv+++gr+vlpk+ aee+ + + +++++++d s++ W +k++y ++ks++yvl+ ++ +Fvk+ngL gD+++++ +++ XP_023881426.1 179 KKELKNSDVGSLGRIVLPKREAEENlpilS--DKDGIQIVIQDvYSNQAWIMKYKYwlNNKSRMYVLE-NTVDFVKQNGLAIGDSITLY--EDEL 268 6899*********************753..447889*7888***99999999999.9******************..4466 PP E..EEEE CS B3 90 felvvkv 96 ++l++++ XP_023881426.1 269 KNLYFSI 275 6666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MDSFFTYTPT TTTNTNTMNF PSTTTNTTTA AASSTPSMPS SQYYFPPHEE NQTLMQFPYA 60 YPLELVQADQ QGQAFTYPSY PFVIGMNSSQ PDLVPDEQQQ EKRLVDAWTT KVARCKRKMA 120 RQKSLCLTKD SASCASSTQM NTQGLAVYDA DHVRNANNVN EDPYTFRTPD NKRLRFLLKK 180 ELKNSDVGSL GRIVLPKREA EENLPILSDK DGIQIVIQDV YSNQAWIMKY KYWLNNKSRM 240 YVLENTVDFV KQNGLAIGDS ITLYEDELKN LYFSIKKVDK PVNEPLYKQQ YTNLGINCNN 300 FSAPFMHESR DEEEASLALL IEQLRHQEEQ DANSLATLPI GGTSSHGRLI

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MDSFFTYTPT TTTNTNTMNF PSTTTNTTTA AASSTPSMPS SQYYFPPHEE NQTLMQFPYA  60
YPLELVQADQ QGQAFTYPSY PFVIGMNSSQ PDLVPDEQQQ EKRLVDAWTT KVARCKRKMA  120
RQKSLCLTKD SASCASSTQM NTQGLAVYDA DHVRNANNVN EDPYTFRTPD NKRLRFLLKK  180
ELKNSDVGSL GRIVLPKREA EENLPILSDK DGIQIVIQDV YSNQAWIMKY KYWLNNKSRM  240
YVLENTVDFV KQNGLAIGDS ITLYEDELKN LYFSIKKVDK PVNEPLYKQQ YTNLGINCNN  300
FSAPFMHESR DEEEASLALL IEQLRHQEEQ DANSLATLPI GGTSSHGRLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	5e-48	B3 family protein