PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023881162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 526aa MW: 58038 Da PI: 9.575 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.7 | 4.9e-06 | 196 | 218 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C k F r+s+L rH r H XP_023881162.1 196 FACSTCAKGFARRSDLARHERIH 218 78*******************99 PP | |||||||
2 | zf-C2H2 | 16.5 | 2.4e-05 | 224 | 248 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C Cgk F ++s L++H r+H XP_023881162.1 224 HVCDhpGCGKQFIQRSALTVHSRVH 248 689999*****************99 PP | |||||||
3 | zf-C2H2 | 24 | 9.9e-08 | 254 | 276 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk+Fs++s+L rH r H XP_023881162.1 254 HMCERCGKPFSDSSSLARHRRIH 276 68*******************99 PP | |||||||
4 | zf-C2H2 | 22 | 4.3e-07 | 282 | 306 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ykCp dC k+F+r+ +L+rH++ H XP_023881162.1 282 YKCPyaDCQKTFTRRTTLTRHQSHH 306 9*********************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 526 aa Download sequence |
MAALSVNHFR TLRDPREGAR AAQHGMDLTS LLNTNRSTAA VGFRNMQYEV PLPMNMNHDM 60 SGNAHYGQQN LYVPNNTGRI KSESNSERGV SPHASEHSSR YSSQTPQQNG MAFSQMASQL 120 ANGMAHARYP TPPQQQHMQS NTMPIISHSY HPNQAQDQSY QQQAQMGAMQ QAAPQEHSPM 180 EGGRTSTGSN SLPKAFACST CAKGFARRSD LARHERIHSG VRPHVCDHPG CGKQFIQRSA 240 LTVHSRVHTG EKPHMCERCG KPFSDSSSLA RHRRIHSGKR PYKCPYADCQ KTFTRRTTLT 300 RHQSHHTGTI EESEAATAAA LASRMSMQGQ RSRGSDEEDY SQDGKSPMPH HIDRPSSASP 360 ANGMNGLPGQ LQRQSSDYYL NAMNSGIAAM PAHLRSEMQP TPRAQSPAQF SMPVTSAQTR 420 SALTSNPSSG YNPPQILEPP TTSAQQQNGI GNSSPHMSTN MGWQSPHATP HDNYSTYTTT 480 NGQYNTVNAT QMYYQQAAVQ QRPHSTGPVD FNHLRTGQEM WVQHQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 9e-19 | C2H2 family protein |