PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880961.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 364aa MW: 41923.7 Da PI: 8.1531

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.4	4.5e-22	87	146	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ XP_023880961.1 87 SRWNPTPEQLRALEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 146 7***************99************************************97 PP
2	Wus_type_Homeobox	115.1	3.4e-37	86	148	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_023880961.1 86 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 148 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MWMMGYNDGG EFNMPDSFNG RKLRPLIPRP LPSTNNINNN NNSTTNTHCL SRIHGTDFFS 60 QCQHLQAAVS EQNKMREFNT PPVVVSSRWN PTPEQLRALE ELYRRGTRTP SAEQIQHITA 120 QLRRYGKIEG KNVFYWFQNH KARERQKRRR QMDLASDDHH RDNIENLNRK ELGANRTVFE 180 VEQTKNWAPH TNCSTLAEES VSIQRSAKAA VAECMTDGWI QFDEGELQQR RNFVERNATR 240 QIMQLTCPPH LTHLINTPTS STTTATTTTT QATVRTTMEQ KLIKTRDLNI FIAPYRENGI 300 NYFNSSVSNE EDGCGESQTL QLFPLRSSSD GNNNINERET DISVSAMNAN FTPFQFFEFL 360 PLKN

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MWMMGYNDGG EFNMPDSFNG RKLRPLIPRP LPSTNNINNN NNSTTNTHCL SRIHGTDFFS  60
QCQHLQAAVS EQNKMREFNT PPVVVSSRWN PTPEQLRALE ELYRRGTRTP SAEQIQHITA  120
QLRRYGKIEG KNVFYWFQNH KARERQKRRR QMDLASDDHH RDNIENLNRK ELGANRTVFE  180
VEQTKNWAPH TNCSTLAEES VSIQRSAKAA VAECMTDGWI QFDEGELQQR RNFVERNATR  240
QIMQLTCPPH LTHLINTPTS STTTATTTTT QATVRTTMEQ KLIKTRDLNI FIAPYRENGI  300
NYFNSSVSNE EDGCGESQTL QLFPLRSSSD GNNNINERET DISVSAMNAN FTPFQFFEFL  360
PLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	6e-51	WOX family protein