PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880651.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 357aa MW: 41011.8 Da PI: 10.2242

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl XP_023880651.1 4 RQRWRSEEDALLRAYVKQYGPREWNLVSQRMNttLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_023880651.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MKERQRWRSE EDALLRAYVK QYGPREWNLV SQRMNTTLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNRTVAP 120 IEDGKYDRIL ETFAEKLVKE RKAPAYLMAT SNGGFLHSDP PAPAPALLPP WLSNSNGTST 180 VRPPSPSVTL SLSPSTVAAP PPIPWLQPDR GSDNNSLVFG NLQPQGSVPG CGESMLISEL 240 VDCCRDLEEG HRAWAAHKKE AAWRLRRVEL QLESEKAGRR REKMEEIEAK VKALREEQKV 300 ALDRIEAEYR EQLVGLRRDA EAKEQKLAEQ WTSKHLRLTK FLEQMGCRPR LSEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MKERQRWRSE EDALLRAYVK QYGPREWNLV SQRMNTTLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNRTVAP  120
IEDGKYDRIL ETFAEKLVKE RKAPAYLMAT SNGGFLHSDP PAPAPALLPP WLSNSNGTST  180
VRPPSPSVTL SLSPSTVAAP PPIPWLQPDR GSDNNSLVFG NLQPQGSVPG CGESMLISEL  240
VDCCRDLEEG HRAWAAHKKE AAWRLRRVEL QLESEKAGRR REKMEEIEAK VKALREEQKV  300
ALDRIEAEYR EQLVGLRRDA EAKEQKLAEQ WTSKHLRLTK FLEQMGCRPR LSEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-158	MYB family protein