PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023880231.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 149aa MW: 17194 Da PI: 9.7765 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84 | 8.9e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKA+ELS+LCdae+++++fs gkl+ey+s XP_023880231.1 9 KKIDNTTARQVTFSKRRRGLFKKAFELSTLCDAEISLMVFSAAGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 24.8 | 9.1e-10 | 94 | 144 | 20 | 70 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 +a L+ke+e+ +e+R++ Ge+L ++++eLq+L+++L +l+++ ++K XP_023880231.1 94 SYAMLNKETEEKTHELRNIRGEELPGMDIEELQKLKKELVVGLSRVIETKV 144 5788999999999*********************************99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MTRRRIQIKK IDNTTARQVT FSKRRRGLFK KAFELSTLCD AEISLMVFSA AGKLFEYASS 60 SMQLVIERRN LHPENLGKMD QLSLELQLLE NGTSYAMLNK ETEEKTHELR NIRGEELPGM 120 DIEELQKLKK ELVVGLSRVI ETKVSTTYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-63 | MIKC_MADS family protein |