PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023880227.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 307aa    MW: 32833.3 Da    PI: 6.9811
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023880227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.10.000181852231255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++ +L++l+ +      +K + a++L +A+ YIk Lq
  XP_023880227.1 185 RKEKLGERITTLQQLVSPF-----GKTDTASVLHEAMGYIKFLQ 223
                     66788899999***99998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MAKNEGFVGD HLRLRGAPAA AATFSQLLLA EDDDDDDENN NGVAVAVGLD VDQTTSFNYT  60
SSVFSSEKPP KMLCFGNYHQ KHHQGDQLVY PSITENNITN TNTTTPQKSG VTCSDSSSAS  120
SGNNNNNSCV TLSVNTLSKP DKKRNGLGQE SAQCGSTITT AVVATQRTSK RTKTANPTPA  180
GQAKRKEKLG ERITTLQQLV SPFGKTDTAS VLHEAMGYIK FLQDQVQVLC SPYLQRLPSS  240
SQHHLPKLES GENGGGEAAR KDLRSIGLCL VPVDCTVHVA NNNGADFWSP AAMGNNVCSP  300
STKHSEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.12e-44bHLH family protein