PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023876869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 202aa MW: 23413 Da PI: 10.2856 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.5 | 2.4e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_023876869.1 9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 70.5 | 5.3e-24 | 79 | 169 | 8 | 97 |
K-box 8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + ++e ++++ +++ + L+k++e L+ ++R+llG++Le + + eLqq+e+qLe+sl+kiR++Kn+l++eqie+l+++ek + een +Lr+k XP_023876869.1 79 NgKSEGTNQHVKEDTQSLEKKLELLEVSKRKLLGDGLELCPIDELQQVENQLERSLTKIRARKNQLYREQIEQLREQEKFQLEENAKLRAK 169 24778889*********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSS 60 CMSKTIERYQ KRSKDQGLNG KSEGTNQHVK EDTQSLEKKL ELLEVSKRKL LGDGLELCPI 120 DELQQVENQL ERSLTKIRAR KNQLYREQIE QLREQEKFQL EENAKLRAKC GLPPLHPSSK 180 QREVNRRSLD VETELFIGPP KR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 5e-70 | MIKC_MADS family protein |