PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876761.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

DBB

Protein Properties

Length: 237aa MW: 26334.7 Da PI: 4.6459

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.4	2.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ XP_023876761.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	29.2	1.9e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + ++C+ +++k + +fC +++ l+C+dC + +H+ H XP_023876761.1 53 KLPRCDICQDKAAFIFCVEDRALFCQDCDEPIHSAgslsanH 94 789******************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCH SNKLPRCDIC 60 QDKAAFIFCV EDRALFCQDC DEPIHSAGSL SANHQRFLAT GIRVALSSGC NKETEKSSLE 120 PPNENKQQVS LKTPTQQASS FSSQWALDEF LHFSDPESSD KKEPLELGEL EWIADMGLFA 180 DQFPQEALAA AEVPQLPMSQ PSNFTSYRPV KSNMPYKKPR IEFPEDDDEH FTVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	1e-104	DBB family protein