PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023876738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 218aa MW: 25080.3 Da PI: 8.2241 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.4 | 2.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl XP_023876738.1 14 KGPWTPEEDQVLISYIQTYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.8 | 1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e ++++++ lG++ W++Ia++++ gRt++++k++w+++l XP_023876738.1 67 RGNFSMEEEETIIKLHHILGNR-WSAIAARLP-GRTDNEIKNFWNSHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MVRTPCCEKM GLKKGPWTPE EDQVLISYIQ TYGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SMEEEETIIK LHHILGNRWS AIAARLPGRT DNEIKNFWNS HLKKRSLAQN 120 LATPTTTNQA VGTPGYMLDR DFQGHVHAPN FQQESWKFVC LDPIRMEAEG SSQTISMKTE 180 ETFNNDSSEN NDEMDFWYKL FIKSGESSQP HVNLGQFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 1e-73 | MYB family protein |