PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876455.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 524aa MW: 59566 Da PI: 7.0337

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.3	7.5e-20	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t+ q+ +Le+++++++yp++e++ +LA++lgLte+q++ WF+ rR k+kk XP_023876455.1 20 KKRRLKTPAQVMALERFYNEHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKK 75 8999**************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MEESSEVHSE ENKVSSEKDK KRRLKTPAQV MALERFYNEH KYPTEEMKSQ LAEQLGLTEK 60 QISGWFCHRR LKDKKLLRDE ACASGRQDRS SVVIQDRGSG LGQDSCGSTK HGDYRNIDPR 120 EVESRRLYGN DFQVSDLTYK HMSHYTETVS GTDDTSSESS SSSQDKLFSQ TEDPYDVENS 180 RYLTHNGAIA PINAKSAKIM GYKPSGYLKV KGEIENAAIT AVKRQLGGHY REDGPPLGVE 240 FQPLPPGAFE SPIQKPVREP YYDEDLSIPN SPDISGAERQ PSLSNGYEPY NSKLSSQDLY 300 MEEANSSGMH GSHYQDKISQ LKQKSTVLNH VKPFPKQNSS LDLYEDSAGE TSVYNSKRNQ 360 RMSSKHGVEG MRIDSITNHR GHYDGKIESE MHDYANVSPN VIQRNEYFKF KPPNLIHNRF 420 ESLDTEERGL STRMKKEEKV NRKWKGIKEQ GNQVKLKMHS TNEIKVPKRV RHDLLQQDYV 480 TKAPFTEMQT RKFLSKGSVM EMPSSFSEDE TAENSSSQEL GVSS

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MEESSEVHSE ENKVSSEKDK KRRLKTPAQV MALERFYNEH KYPTEEMKSQ LAEQLGLTEK  60
QISGWFCHRR LKDKKLLRDE ACASGRQDRS SVVIQDRGSG LGQDSCGSTK HGDYRNIDPR  120
EVESRRLYGN DFQVSDLTYK HMSHYTETVS GTDDTSSESS SSSQDKLFSQ TEDPYDVENS  180
RYLTHNGAIA PINAKSAKIM GYKPSGYLKV KGEIENAAIT AVKRQLGGHY REDGPPLGVE  240
FQPLPPGAFE SPIQKPVREP YYDEDLSIPN SPDISGAERQ PSLSNGYEPY NSKLSSQDLY  300
MEEANSSGMH GSHYQDKISQ LKQKSTVLNH VKPFPKQNSS LDLYEDSAGE TSVYNSKRNQ  360
RMSSKHGVEG MRIDSITNHR GHYDGKIESE MHDYANVSPN VIQRNEYFKF KPPNLIHNRF  420
ESLDTEERGL STRMKKEEKV NRKWKGIKEQ GNQVKLKMHS TNEIKVPKRV RHDLLQQDYV  480
TKAPFTEMQT RKFLSKGSVM EMPSSFSEDE TAENSSSQEL GVSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	25	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-105	HB-other family protein