PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023876292.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 283aa    MW: 32855.1 Da    PI: 5.7142
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023876292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3376.2e-12105196190
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEE.EEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvv.Fkldgrse 89 
                     f+k+l +sdv+   r+ +pk  +e +   +++++++ + l+d    ++W++++++  +++s++y++ +++k+F ++++L +gD+++ Fk  ++++
  XP_023876292.1 105 FEKTLRKSDVTVG-RILIPKIETELYmpRLDSRKGIIMNLTDmDYQQVWSFRFRFwiNNSSRMYLF-ENTKDFIRDKHLVVGDSIMiFK--DDQT 195
                     8999989888876.69*******999**888899999*****66669******9875555555555.5***************986144..3344 PP

                     E CS
              B3  90 f 90 
                     +
  XP_023876292.1 196 G 196
                     4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MAGNFPVNYN PSDPFANAMQ MGGMFNNNNN NNQVFVNYPP APPAGPEMES SSASASASTF  60
AAVKRRQHCR RFLRNSIVQP PFHQPIPQPT PIPRQIDQSI VRFLFEKTLR KSDVTVGRIL  120
IPKIETELYM PRLDSRKGII MNLTDMDYQQ VWSFRFRFWI NNSSRMYLFE NTKDFIRDKH  180
LVVGDSIMIF KDDQTGNHFI RGIKTFIQQD LSNTANNTVN QYLPAMDEYV SPLYYENTII  240
NNENTFLNNY SEPFYAGVQP EMPDSPELET PFNWLDFINF PEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.19e-30B3 family protein