PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876096.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 241aa MW: 27339.7 Da PI: 6.1783

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876096.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	13	59	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd++l+++v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_023876096.1 13 NLWKPEEDLILKNYVETHGEGNWATVSERSGLMRGGKSCRLRWKNYL 59 56*******************************************97 PP
2	Myb_DNA-binding	53.9	4e-17	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_023876096.1 65 RGEMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 110 8999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MESNRVKPQL KKNLWKPEED LILKNYVETH GEGNWATVSE RSGLMRGGKS CRLRWKNYLR 60 PNIKRGEMSK EEEDLIIRMH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL NKKCLLGKRK 120 ATNSNNHEEE ENDENMNKKN KLGPPFHSEP HGSSLISLTS TTKLGSEEGS RKEESTVTEG 180 NWMDYDASSF NCDIMDYPIM PEAAAGGAGH SASFVFDDEP LIAYMDSFIL LEAFGCGGEE 240 L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	3e-64	MYB family protein