PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023875264.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 28907.8 Da PI: 9.2825 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.4 | 1.5e-49 | 15 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrF+Ptdeelv +yLk kv + +l++ +vi+e++++k++Pw+L p + e+e yfFs+++ ky++g+r++r+t+sgyWk+tg+dk+++s XP_023875264.1 15 LPPGFRFQPTDEELVFQYLKCKVFSCPLPA-SVIPEINVCKFDPWELlPG---ELEQERYFFSQKEAKYPNGNRTKRTTNSGYWKTTGTDKKIVS 105 79****************************.99**************343...346799***********************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kktLvfykg+ p+g++tdW+mheyrl XP_023875264.1 106 PrRNHIVGMKKTLVFYKGKPPHGSRTDWIMHEYRL 140 867788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDKLSFTQEG VTRILPPGFR FQPTDEELVF QYLKCKVFSC PLPASVIPEI NVCKFDPWEL 60 LPGELEQERY FFSQKEAKYP NGNRTKRTTN SGYWKTTGTD KKIVSPRRNH IVGMKKTLVF 120 YKGKPPHGSR TDWIMHEYRL VYAETTGCTF PQIHDSIQNF LVQMENWVLC RIYLKKGSVM 180 KNNDMLINQT SSNNKIENVG VAQPRFFNFM LGYKSSLPLA SSTSSSSSSS SSTTTEVSSS 240 GADHEESTSA RTTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 8e-78 | NAC family protein |