PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875023.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 182aa    MW: 20902.8 Da    PI: 5.7551
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.5e-053153123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C +C++ F++   L  H++ H
  XP_023875023.1 31 YECVYCKRGFTTAQALGGHMNIH 53
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MEYNCQEDSK SSSEESDRSV QIDDMGTGRS YECVYCKRGF TTAQALGGHM NIHRKDRVKT  60
RPSSVPSVSS KADENYVNLR SYTSIQSYPP HYNSTAPEVQ VSSQVTFPVS AWHMRPPNTQ  120
HTDHVQNNPL HPNLFEEDWR RSLSLQVGPT HVVVEHDREK RREDGSEEDD ELDLELRLGH  180
YP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.12e-13C2H2 family protein