PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023874412.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | B3 | ||||||||
Protein Properties | Length: 196aa MW: 23047.1 Da PI: 6.7826 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.3 | 1.2e-17 | 16 | 104 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv++p++ ++ r+++p f+++ + + +k+ +l++ + + W vk+ k s+++++ +GW+eFvk+n ++ gDf+vF+++g++ f +k XP_023874412.1 16 FFKVFLPEYCSE--RMRIPDAFVSQLDRS--VPKKAILRSGNRKIWHVKV--GKISDGVFFLNGWQEFVKDNLIELGDFLVFQYNGHDVF--GFK 102 899997777776..58*******988655..5668***************..9*9*9*99999*********************998777..666 PP EE CS B3 96 vf 97 +f XP_023874412.1 103 IF 104 66 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MVKNMSSTTT KRCTRFFKVF LPEYCSERMR IPDAFVSQLD RSVPKKAILR SGNRKIWHVK 60 VGKISDGVFF LNGWQEFVKD NLIELGDFLV FQYNGHDVFG FKIFGNSGCE KEEIETHVSI 120 NNGIEYLKEE EEEAEETEVE ENDSDSDDDE DYEDEVRNKK KKEKNIRKKR PWTKYCDRGQ 180 KKIVWKISRG LGKLVL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 157 | 163 | RNKKKKE |
2 | 157 | 169 | RNKKKKEKNIRKK |
3 | 159 | 186 | KKKKEKNIRKKRPWTKYCDRGQKKIVWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 4e-23 | B3 family protein |