PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874058.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

SBP

Protein Properties

Length: 531aa MW: 58629.6 Da PI: 8.5384

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874058.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.6	5.4e-41	173	250	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dl++ k+yhrrh++Ce hsk+p+v+v+g+e+rfCqqCsrfhelsefD++krsCrrrL++hn+rrr++q+ XP_023874058.1 173 RCQVEGCNIDLKSSKDYHRRHRICESHSKSPKVIVAGMERRFCQQCSRFHELSEFDDKKRSCRRRLSDHNARRRRPQP 250 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MDWNSKATSE WDWEKLAGFS SKTIDIPELV QPSNHELEGG VDNTSVYSSG GGGGFSGSDL 60 GHGSSSRSSI SASADSSSKE GIKKSGTVDG FPKDFTEKNE WTRADNTGKF PSLGASISSG 120 EPMIGLKLGK RTYFEDLCMA STTKTLPTSM TPTSSTVPGK RSRASYQSTQ TPRCQVEGCN 180 IDLKSSKDYH RRHRICESHS KSPKVIVAGM ERRFCQQCSR FHELSEFDDK KRSCRRRLSD 240 HNARRRRPQP EAIQFHSPGL SSSIYGDGRQ QMNLVLNRVP LSAANPTWQS ACNDNKVTQT 300 GHSLTRPTKT GGIDRQLKLL TDMPEVPSML QTYSSKMLSF ENSTPQVLSQ GLEASSFASN 360 VNVAPDLRRA LSLLSTNSLG LNDSEGNALD QLMHVNRSSV AQPAVHAELQ NWDFSSSGHE 420 QVEQPPPESR ARSLNYHNNG SGHYQEFQLF KSLMNLAAFF PIKSTDYWKL ALPMKSLQGF 480 CCSFGQAGKT SNQSTKVTCF EIGLFASKQV FCNIHWLLDR SDLLFVEIML I

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MDWNSKATSE WDWEKLAGFS SKTIDIPELV QPSNHELEGG VDNTSVYSSG GGGGFSGSDL  60
GHGSSSRSSI SASADSSSKE GIKKSGTVDG FPKDFTEKNE WTRADNTGKF PSLGASISSG  120
EPMIGLKLGK RTYFEDLCMA STTKTLPTSM TPTSSTVPGK RSRASYQSTQ TPRCQVEGCN  180
IDLKSSKDYH RRHRICESHS KSPKVIVAGM ERRFCQQCSR FHELSEFDDK KRSCRRRLSD  240
HNARRRRPQP EAIQFHSPGL SSSIYGDGRQ QMNLVLNRVP LSAANPTWQS ACNDNKVTQT  300
GHSLTRPTKT GGIDRQLKLL TDMPEVPSML QTYSSKMLSF ENSTPQVLSQ GLEASSFASN  360
VNVAPDLRRA LSLLSTNSLG LNDSEGNALD QLMHVNRSSV AQPAVHAELQ NWDFSSSGHE  420
QVEQPPPESR ARSLNYHNNG SGHYQEFQLF KSLMNLAAFF PIKSTDYWKL ALPMKSLQGF  480
CCSFGQAGKT SNQSTKVTCF EIGLFASKQV FCNIHWLLDR SDLLFVEIML I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	247	KKRSCRRRLSDHNARRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	4e-56	SBP family protein