PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023873416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 271aa MW: 31123.3 Da PI: 5.0318 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.2e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l d+++ G g W+ +++ g++R++k+c++rw +yl XP_023873416.1 14 RGAWSAEEDKILTDYIATNGEGKWRNLPKEAGLKRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.2e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T E++l+++++k+lG++ W++Ia++++ gRt++++k++w+++l XP_023873416.1 67 RGNITSAEEDLIIRLHKLLGNR-WALIAKRLP-GRTDNEIKNYWNTVL 112 7899******************.*********.************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MGRSPCCSKV GMNRGAWSAE EDKILTDYIA TNGEGKWRNL PKEAGLKRCG KSCRLRWINY 60 LKPDIKRGNI TSAEEDLIIR LHKLLGNRWA LIAKRLPGRT DNEIKNYWNT VLKKKLSNKV 120 KEASDDNKKI KLPVKSVPEV VKTKAFRFTK VFVTPQEGKH EAFDDNNNSV LQEPIYSEND 180 NLELELKSID CQQPLPLVSF DEEEKSSNIA LNFSTEELLM FDNFETDIWN LCMFDDNMEG 240 EANNGGANDL CSLLDEPLPF YEENSEQMHW I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 2e-62 | MYB family protein |