PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873153.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Nin-like

Protein Properties

Length: 400aa MW: 43506.8 Da PI: 5.353

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	94.4	8.2e-30	15	66	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ XP_023873153.1 15 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 66 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
ATSGSRRHEK KRSTAEKNVS LSVLQQYFSG SLKDAAKSIG VCPTTLKRIC RQHGISRWPS 60 RKINKVNRSL RKIQTVLDSV QGVEGGLKFD PNTGEFMAAG SIIQETVSQK SLFPDKNLCV 120 KNAELATQNA VSVPSAPGFD GMNSLIKLEE DDCSMGLNQV APSMGKLNTN TCGEELRKSN 180 AVPCQQASLE TTSQASPESV SLGSYLVNRG EKYSLNMDSL KLENDCQFVS LSSLAAGDDI 240 DTGINVDDGI VEHNQPSSSG MTDSSNGSSS MIRGSSSSSQ SFEEQKYSKV KTSCVDSGSK 300 IIVKATYRED TIRFKFEPSA GCFQLYEEVG KRFKLQNGTF QLKYLDDEEE WVMLVSDSDL 360 QECLEILDDI GTRSVKLLVR DMPCSMNSSG SSNCFLTGGL

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

ATSGSRRHEK KRSTAEKNVS LSVLQQYFSG SLKDAAKSIG VCPTTLKRIC RQHGISRWPS  60
RKINKVNRSL RKIQTVLDSV QGVEGGLKFD PNTGEFMAAG SIIQETVSQK SLFPDKNLCV  120
KNAELATQNA VSVPSAPGFD GMNSLIKLEE DDCSMGLNQV APSMGKLNTN TCGEELRKSN  180
AVPCQQASLE TTSQASPESV SLGSYLVNRG EKYSLNMDSL KLENDCQFVS LSSLAAGDDI  240
DTGINVDDGI VEHNQPSSSG MTDSSNGSSS MIRGSSSSSQ SFEEQKYSKV KTSCVDSGSK  300
IIVKATYRED TIRFKFEPSA GCFQLYEEVG KRFKLQNGTF QLKYLDDEEE WVMLVSDSDL  360
QECLEILDDI GTRSVKLLVR DMPCSMNSSG SSNCFLTGGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	4e-99	Nin-like family protein